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fileout_netcdf memory errors
Description
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## ---------------------------------------------- ##
## bes 3.19.1 test suite: bes.conf besstandalone. ##
## ---------------------------------------------- ##
1: BESCMD $abs_srcdir/bescmd/simpleT00.0.bescmd ok
2: BESCMD $abs_srcdir/bescmd/simpleT00.1.bescmd ok
3: BESCMD $abs_srcdir/bescmd/simpleT00.2.bescmd ok
4: BESCMD $abs_srcdir/bescmd/simpleT00.3.bescmd ok
5: BESCMD $abs_srcdir/bescmd/simpleT00.4.bescmd ok
6: BESCMD $abs_srcdir/bescmd/simpleT00.5.bescmd ok
7: BESCMD $abs_srcdir/bescmd/simpleT00.6.bescmd ok
8: BESCMD $abs_srcdir/bescmd/simpleT00.7.bescmd ok
9: BESCMD $abs_srcdir/bescmd/arrayT.0.bescmd ok
10: BESCMD $abs_srcdir/bescmd/arrayT.1.bescmd ok
11: BESCMD $abs_srcdir/bescmd/arrayT.2.bescmd FAILED (fonc_handler_test.at:24)
12: BESCMD $abs_srcdir/bescmd/arrayT.3.bescmd FAILED (fonc_handler_test.at:25)
13: BESCMD $abs_srcdir/bescmd/arrayT01.0.bescmd ok
14: BESCMD $abs_srcdir/bescmd/arrayT01.1.bescmd ok
15: BESCMD $abs_srcdir/bescmd/arrayT01.2.bescmd FAILED (fonc_handler_test.at:29)
16: BESCMD $abs_srcdir/bescmd/arrayT01.3.bescmd FAILED (fonc_handler_test.at:30)
17: BESCMD $abs_srcdir/bescmd/cedar.0.bescmd ok
18: BESCMD $abs_srcdir/bescmd/cedar.1.bescmd ok
19: BESCMD $abs_srcdir/bescmd/cedar.2.bescmd FAILED (fonc_handler_test.at:34)
20: BESCMD $abs_srcdir/bescmd/cedar.3.bescmd FAILED (fonc_handler_test.at:35)
21: BESCMD $abs_srcdir/bescmd/fits.0.bescmd ok
22: BESCMD $abs_srcdir/bescmd/fits.1.bescmd ok
23: BESCMD $abs_srcdir/bescmd/fits.2.bescmd FAILED (fonc_handler_test.at:39)
24: BESCMD $abs_srcdir/bescmd/fits.3.bescmd FAILED (fonc_handler_test.at:40)
25: BESCMD $abs_srcdir/bescmd/gridT.0.bescmd ok
26: BESCMD $abs_srcdir/bescmd/gridT.1.bescmd ok
27: BESCMD $abs_srcdir/bescmd/gridT.2.bescmd FAILED (fonc_handler_test.at:44)
28: BESCMD $abs_srcdir/bescmd/gridT.3.bescmd FAILED (fonc_handler_test.at:45)
29: BESCMD $abs_srcdir/bescmd/namesT.0.bescmd ok
30: BESCMD $abs_srcdir/bescmd/namesT.1.bescmd ok
31: BESCMD $abs_srcdir/bescmd/namesT.2.bescmd FAILED (fonc_handler_test.at:49)
32: BESCMD $abs_srcdir/bescmd/namesT.3.bescmd FAILED (fonc_handler_test.at:50)
33: BESCMD $abs_srcdir/bescmd/structT00.0.bescmd ok
34: BESCMD $abs_srcdir/bescmd/structT00.1.bescmd ok
35: BESCMD $abs_srcdir/bescmd/structT00.2.bescmd ok
36: BESCMD $abs_srcdir/bescmd/structT00.3.bescmd ok
37: BESCMD $abs_srcdir/bescmd/structT01.0.bescmd ok
38: BESCMD $abs_srcdir/bescmd/structT01.1.bescmd ok
39: BESCMD $abs_srcdir/bescmd/structT01.2.bescmd FAILED (fonc_handler_test.at:59)
40: BESCMD $abs_srcdir/bescmd/structT01.3.bescmd FAILED (fonc_handler_test.at:60)
41: BESCMD $abs_srcdir/bescmd/structT02.0.bescmd ok
42: BESCMD $abs_srcdir/bescmd/structT02.1.bescmd ok
43: BESCMD $abs_srcdir/bescmd/structT02.2.bescmd ok
44: BESCMD $abs_srcdir/bescmd/structT02.3.bescmd ok
45: BESCMD $abs_srcdir/bescmd/fnoc.0.bescmd ok
46: BESCMD $abs_srcdir/bescmd/fnoc.1.bescmd FAILED (fonc_handler_test.at:77)
47: BESCMD $abs_srcdir/bescmd/fnoc.2.bescmd FAILED (fonc_handler_test.at:78)
48: BESCMD $abs_srcdir/bescmd/t_string.0.bescmd ok
49: BESCMD $abs_srcdir/bescmd/t_string.1.bescmd FAILED (fonc_handler_test.at:83)
50: BESCMD $abs_srcdir/bescmd/t_string.2.bescmd FAILED (fonc_handler_test.at:84)
51: BESCMD $abs_srcdir/bescmd/hdf4.0.bescmd ok
52: BESCMD $abs_srcdir/bescmd/hdf4.1.bescmd ok
53: BESCMD $abs_srcdir/bescmd/hdf4.2.bescmd FAILED (fonc_handler_test.at:90)
54: BESCMD $abs_srcdir/bescmd/hdf4.3.bescmd FAILED (fonc_handler_test.at:91)
55: BESCMD $abs_srcdir/bescmd/hdf4_constraint.0.bescmd ok
56: BESCMD $abs_srcdir/bescmd/hdf4_constraint.1.bescmd ok
57: BESCMD $abs_srcdir/bescmd/hdf4_constraint.2.bescmd FAILED (fonc_handler_test.at:95)
58: BESCMD $abs_srcdir/bescmd/hdf4_constraint.3.bescmd FAILED (fonc_handler_test.at:96)
59: BESCMD $abs_srcdir/bescmd/function_result_unwrap.bescmd ok
60: BESCMD $abs_srcdir/bescmd/gridT.4.bescmd FAILED (fonc_handler_test.at:101)
61: BESCMD $abs_srcdir/bescmd/gridT.5.bescmd FAILED (fonc_handler_test.at:102)
62: BESCMD $abs_srcdir/bescmd/gridT.6.bescmd FAILED (fonc_handler_test.at:103)
63: BESCMD $abs_srcdir/bescmd/gridT.7.bescmd FAILED (fonc_handler_test.at:104)
64: BESCMD $abs_srcdir/bescmd/gridT.8.bescmd FAILED (fonc_handler_test.at:106)
65: BESCMD $abs_srcdir/bescmd/gridT.9.bescmd FAILED (fonc_handler_test.at:107)
66: BESCMD $abs_srcdir/bescmd/gridT.10.bescmd FAILED (fonc_handler_test.at:108)
67: BESCMD $abs_srcdir/bescmd/gridT.11.bescmd FAILED (fonc_handler_test.at:109)
## ------------- ##
## Test results. ##
## ------------- ##
ERROR: All 67 tests were run,
30 failed unexpectedly.
## ---------------------------------- ##
## fonc_handler_test.log was created. ##
## ---------------------------------- ##
Please send `modules/fileout_netcdf/tests/fonc_handler_test.log' and all information you think might help:
To: <support@opendap.org>
Subject: [bes 3.19.1] fonc_handler_test: 11 12 15 16 19 20 23 24 27 28 31 32 39 40 46 47 49 50 53 54 57 58 60 61 62 63 64 65 66 67 failedThese errors all seem to happen at:
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void FONcArray::convert(vector<string> embed)
{
FONcBaseType::convert(embed);
_varname = FONcUtils::gen_name(embed, _varname, _orig_varname);
BESDEBUG("fonc", "FONcArray::convert() - converting array " << _varname << endl);
d_array_type = FONcUtils::get_nc_type(d_a->var());
d_ndims = d_a->dimensions();
d_actual_ndims = d_ndims; //replace this with _a->dimensions(); below TODO
if (d_array_type == NC_CHAR) {
// if we have array of strings then we need to add the string length
// dimension, so add one more to ndims
d_ndims++;
}
d_dim_ids.reserve(d_ndims);
d_dim_sizes.reserve(d_ndims);
Array::Dim_iter di = d_a->dim_begin();
Array::Dim_iter de = d_a->dim_end();
int dimnum = 0;
for (; di != de; di++) {
int size = d_a->dimension_size(di, true);
d_dim_sizes[dimnum] = size;
d_nelements *= size;
// Set COMPRESSION CHUNK SIZE for each dimension.
d_chunksizes.push_back(size <= MAX_CHUNK_SIZE ? size: MAX_CHUNK_SIZE);
BESDEBUG("fonc", "FONcArray::convert() - dim num: " << dimnum << ", dim size: " << size << ", chunk size: " << d_chunksizes[dimnum] << endl);
BESDEBUG("fonc2", *this << endl);
// See if this dimension has already been defined. If it has the
// same name and same size as another dimension, then it is a
// shared dimension. Create it only once and share the FONcDim
FONcDim *use_dim = find_dim(embed, d_a->dimension_name(di), size);
d_dims.push_back(use_dim);
dimnum++;
}
...On this line: d_dim_sizes[dimnum] = size;
Debug this using: -c bes.conf -i bescmd/arrayT.2.bescmd
Environment
None
Status
Assignee
James Gallagher
Reporter
James Gallagher
Labels
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Story Points
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Epic Link
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Priority
Medium